Question: Align the two sequences: GANATTC and GATTANN . What is the numerical score of the alignment ( please do not do the whole Smith -
Align the two sequences: GANATTC and GATTANN What is the numerical score of the alignment please do not do the whole SmithWaterman or NeedlemanWunsch algorithm, a manual alignment is fine, and you can use the Affine penalty is used, if you assign a gap opening penalty of and a gap extension penalty of how does your score compare to the Levenshtein and Hamming Distances? If you were to attempt to construct a dot matrix of this alignment, what is the matrix likely to look like? Can you determine any information about the relationship two sequences from the dot matrix?
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