Design specification $-$

genomeAnalyzer.py

Notebook

Python $3($ipyker

This program must import your sequenceAnalysis module. It is responsible for preparing the summaries and final display of the data.

Input must be from STDIN

Your FastaReader object will read data from sys$.$stdin if it is not given a filename. Notice that the filename is specified as a parameter to your main$($ function. See the last line of the cell containing main$()$ in this notebook:

main$($ 'testGenome.fa$\text{'}).$

When you move main$(0$ to

genomeAnalyzer.py$,$ you can delete the parameter:

main$()$ this will cause the filename parameter to be None $($default parameter$)$ and your FastaReader object will interpret a filename of None as a request to use sys$.$stdin. $($ see the doOpen$()$ method for further info$).$

Your notebook will be used for inspections. For the notebook, you will need to specify the input filename. For

genomeAnalyzer.py$,$ you will need to delete the parameter.