Question: Develop a program that will open a BLASTN (nucleotide to nucleotide search) output file, parse out specific information, and produce formatted output that will be
Develop a program that will open a BLASTN (nucleotide to nucleotide search) output file, parse out specific information, and produce formatted output that will be written to STDOUT (i.e., Standard Output; the terminal window / command line). Before writing your program, copy the BLASTP output file, /home/jorvis1/example_blast.txt, to your home directory. Look through the file and explore the format.
The program should start by opening the input file (you may hardcode the filename in this case), parsing and storing both the query sequence ID (from near the top of the file; look for the string following "Query=") and the query length (found on the line below the query sequence), and displaying them both to STDOUT. Add some additional characters and formatting to your output such that these two fields appear exactly like this in STDOUT:
Query ID: IREALLY LIKEPYTHON
Query Length: 15
Then, it is time to parse information about the significant alignments for this query. Each alignment begins with the ">" symbol. For just the first 10 hits, parse out only the accession (located between the first set of pipe symbols, | | ), length and score. For each of these hits, these three fields should then be written to STDOUT in exactly this format including capitalization spacing and punctuation (as shown here using the real values for the first hit; study the file to understand exactly where these values came from):
Alignment #1: Accession = ref|XM_005094338.1|(Length = 2377, Score = 1098)
Use regular expressions to pull out precisely the parts of the file that you want, which is the definition of parsing. Hint: You will very likely need to use parentheses to put some parts of those expressions into temporary memory (m.group(1), etc.) for later use.
Do not have your regular expression search for hardcoded values; your program should be able to read another BLASTN output file and run successfully, not just this specific one.
Pay careful attention to the exact appearance of the sample output, above. Although it is a good start to be able to, at a minimum, report the requested values, your program must also strive to match the formats specified.
Provide the complete source code AND the output of the program as it runs.
***Data***
BLASTN 2.2.28+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and
Webb Miller (2000), "A greedy algorithm for aligning DNA
sequences", J Comput Biol 2000; 7(1-2):203-14.
Reference for database indexing: Aleksandr Morgulis, George
Coulouris, Yan Raytselis, Thomas L. Madden, Richa Agarwala,
Alejandro A. Schaffer (2008), "Database Indexing for
Production MegaBLAST Searches", Bioinformatics 24:1757-1764.
RID: 05EN72CN01R
Database: Nucleotide collection (nt)
19,024,455 sequences; 48,173,360,552 total letters
Query= Arf1
Length=614
ScoreE
Sequences producing significant alignments:(Bits)Value
ref|XM_005094338.1|PREDICTED: Aplysia californica uncharacte...10980.0
gb|EU829582.1|Linum usitatissimum clone LU0017G02 mRNA sequence3752e-100
ref|XM_005023737.1|PREDICTED: Anas platyrhynchos ADP-ribosyl...3722e-99
ref|XM_004088641.1|PREDICTED: Nomascus leucogenys ADP-ribosy...3644e-97
ref|XM_004088640.1|PREDICTED: Nomascus leucogenys ADP-ribosy...3644e-97
ref|XM_004088639.1|PREDICTED: Nomascus leucogenys ADP-ribosy...3644e-97
ref|XM_003252207.1|PREDICTED: Nomascus leucogenys ADP-ribosy...3644e-97
gb|EU829048.1|Linum usitatissimum clone LU0031C12 mRNA sequence3644e-97
ref|NM_001133245.1|Pongo abelii ADP-ribosylation factor 3 (A...3644e-97
ref|XM_003939112.1|PREDICTED: Saimiri boliviensis boliviensi...3592e-95
ref|XM_003939111.1|PREDICTED: Saimiri boliviensis boliviensi...3592e-95
ref|XM_003939110.1|PREDICTED: Saimiri boliviensis boliviensi...3592e-95
ref|XM_003906306.1|PREDICTED: Papio anubis ADP-ribosylation ...3592e-95
ref|XM_003906305.1|PREDICTED: Papio anubis ADP-ribosylation ...3592e-95
ref|XM_001104802.2|PREDICTED: Macaca mulatta ADP-ribosylatio...3592e-95
dbj|AB220383.1|Macaca fascicularis mRNA, clone QbsB-11372: s...3592e-95
ref|XM_004446938.1|PREDICTED: Dasypus novemcinctus ADP-ribos...3484e-92
ref|NM_001015571.2|Bos taurus ADP-ribosylation factor 3 (ARF...3484e-92
gb|BT020934.1|Bos taurus ADP-ribosylation factor 3 (ARF3), m...3484e-92
ref|XM_005040511.1|PREDICTED: Ficedula albicollis ADP-ribosy...3445e-91
ref|XM_004692792.1|PREDICTED: Condylura cristata ADP-ribosyl...3445e-91
ref|XM_002194789.2|PREDICTED: Taeniopygia guttata ADP-ribosy...3445e-91
ref|XM_004599350.1|PREDICTED: Ochotona princeps ADP-ribosyla...3422e-90
ref|XM_002711065.1|PREDICTED: Oryctolagus cuniculus ADP-ribo...3379e-89
ref|NM_001162545.1|Ovis aries ADP-ribosylation factor 3 (ARF...3379e-89
ref|NM_001126681.1|Xenopus (Silurana) tropicalis ADP-ribosyl...3379e-89
ref|XM_004274380.1|PREDICTED: Orcinus orca ADP-ribosylation ...3314e-87
ref|XM_004313118.1|PREDICTED: Tursiops truncatus ADP-ribosyl...3262e-85
ref|XM_001504136.2|PREDICTED: Equus caballus ADP-ribosylatio...3262e-85
ref|XM_002752401.2|PREDICTED: Callithrix jacchus ADP-ribosyl...3161e-82
ref|XM_003535988.1|PREDICTED: Glycine max ADP-ribosylation f...3092e-80
dbj|AK286924.1|Glycine max cDNA, clone: GMFL01-40-F143092e-80
dbj|AK286518.1|Glycine max cDNA, clone: GMFL01-30-F143092e-80
ref|XM_004586336.1|PREDICTED: Ochotona princeps ADP-ribosyla...3052e-79
ref|NM_001173559.1|Salmo salar ADP-ribosylation factor 1 lik...3039e-79
gb|BT043627.1|Salmo salar clone HM5_0244 ADP-ribosylation fa...3039e-79
ref|XM_003555742.1|PREDICTED: Glycine max ADP-ribosylation f...2984e-77
ref|XM_003555741.1|PREDICTED: Glycine max ADP-ribosylation f...2984e-77
dbj|AK286615.1|Glycine max cDNA, clone: GMFL01-32-K152984e-77
gb|BT057759.1|Salmo salar clone ssal-rgb-527-288 ADP-ribosyl...2945e-76
ref|NM_001012248.2|Danio rerio ADP-ribosylation factor 3b (a...2922e-75
gb|BC163292.1|Danio rerio ADP-ribosylation factor 3b, mRNA (...2922e-75
tpg|BK007271.1|TPA: Amblyomma variegatum ADP ribosylation fa...2879e-74
dbj|AK287022.1|Glycine max cDNA, clone: GMFL01-42-E242879e-74
ref|XM_003216952.1|PREDICTED: Anolis carolinensis ADP-ribosy...2814e-72
ref|XM_002431325.1|Pediculus humanus corporis ADP-ribosylati...2814e-72
ref|XM_005040510.1|PREDICTED: Ficedula albicollis ADP-ribosy...2785e-71
ref|XM_003980625.1|PREDICTED: Felis catus ADP-ribosylation f...2785e-71
ref|XM_005061367.1|PREDICTED: Ficedula albicollis ADP-ribosy...2631e-66
ref|XM_003961069.1|PREDICTED: Takifugu rubripes ADP-ribosyla...2432e-60
ref|XM_004891797.1|PREDICTED: Heterocephalus glaber uncharac...2417e-60
ref|XM_002130518.2|PREDICTED: Ciona intestinalis ADP-ribosyl...2379e-59
ref|XM_004891798.1|PREDICTED: Heterocephalus glaber uncharac...2301e-56
gb|GQ279375.1|Marsupenaeus japonicus ADP ribosylation factor...2262e-55
ref|XM_001899177.1|Brugia malayi ADP-ribosylation factor 4 p...2131e-51
ref|NM_001272158.1|Drosophila melanogaster ADP ribosylation ...2023e-48
ref|NM_079892.3|Drosophila melanogaster ADP ribosylation fac...2023e-48
gb|FJ637149.1|Synthetic construct Drosophila melanogaster cl...2023e-48
gb|FJ632736.1|Synthetic construct Drosophila melanogaster cl...2023e-48
gb|AY071450.1|Drosophila melanogaster RE53354 full length cDNA2023e-48
ref|XM_005061366.1|PREDICTED: Ficedula albicollis ADP-ribosy...1853e-43
gb|BT082428.1|Anoplopoma fimbria clone afim-evh-507-178 ADP-...1824e-42
ref|XM_002099605.1|Drosophila yakuba Arf102F (DyakArf102F),...1747e-40
ref|XM_001982651.1|Drosophila erecta GG16407 (DereGG16407),...1747e-40
gb|AY231946.1|Drosophila yakuba clone yak-em_Arf102F mRNA se...1747e-40
gb|AE014135.3|Drosophila melanogaster chromosome 4, complete...1592e-35
gb|AC010577.5|Drosophila melanogaster clone BACR22J20, compl...1592e-35
gb|L25062.1|DROARF2ADrosophila melanogaster ADP-ribosylation...1592e-35
ref|XM_004891799.1|PREDICTED: Heterocephalus glaber uncharac...1587e-35
emb|CR450743.3|Zebrafish DNA sequence from clone CH211-157H1...1154e-22
gb|AC166090.23|Glycine max clone gmw1-103e11, complete sequence1154e-22
emb|AL953886.9|Zebrafish DNA sequence from clone CH211-241A1...1154e-22
emb|AL591389.5|Zebrafish DNA sequence from clone BUSM1-202L1...1154e-22
gb|GQ483536.1|Marsupenaeus japonicus ADP-ribosylation factor...99.04e-17
ref|XM_790917.3|PREDICTED: Strongylocentrotus purpuratus E3 ...84.21e-12
ref|XM_001819859.2|Aspergillus oryzae RIB40 ADP-ribosylation...78.76e-11
ref|XM_002374515.1|Aspergillus flavus NRRL3357 ADP-ribosylat...78.76e-11
ref|XM_001186642.2|PREDICTED: Strongylocentrotus purpuratus ...76.82e-10
ref|XM_001399874.2|Aspergillus niger CBS 513.88 ADP-ribosyla...76.82e-10
dbj|AB224387.1|Aspergillus oryzae cDNA, contig sequence: AoE...76.82e-10
ALIGNMENTS
>ref|XM_005094338.1| PREDICTED: Aplysia californica uncharacterized LOC101860729 (LOC101860729),
mRNA
Length=2377
Score =1098 bits (594),Expect = 0.0
Identities = 594/594 (100%), Gaps = 0/594 (0%)
Strand=Plus/Plus
Query21AACTGATCAAAATGGGGAACATGTTTGCTTCGCTGTTCAAGGGCCTCTTTGGGAGGTCCG80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct593AACTGATCAAAATGGGGAACATGTTTGCTTCGCTGTTCAAGGGCCTCTTTGGGAGGTCCG652
Query81AAATGAGAATTTTGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGT140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct653AAATGAGAATTTTGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGT712
Query141TGAAACTGGGTGAAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGG200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct713TGAAACTGGGTGAAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGG772
Query201AGTACAAGAACATCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCC260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct773AGTACAAGAACATCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCC832
Query261TTTGGAGGCATTATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACA320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct833TTTGGAGGCATTATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACA892
Query321GAGAAAGAGTTGGTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGA380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct893GAGAAAGAGTTGGTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGA952
Query381GAGATGCCATCCTCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTG440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct953GAGATGCCATCCTCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTG1012
Query441CAGAAATCACAGACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGG500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct1013CAGAAATCACAGACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGG1072
Query501CTACATGTGCCACAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAATACTC560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct1073CTACATGTGCCACAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAATACTC1132
Query561TAAAAAAGAAATCCTCATAATGAGTGGTTCTAGAGGCTTTTCTTTTTATTTTCC614
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct1133TAAAAAAGAAATCCTCATAATGAGTGGTTCTAGAGGCTTTTCTTTTTATTTTCC1186
>gb|EU829582.1| Linum usitatissimum clone LU0017G02 mRNA sequence
Length=858
Score =375 bits (203),Expect = 2e-100
Identities = 386/476 (81%), Gaps = 6/476 (1%)
Strand=Plus/Plus
Query83ATGAGAATTTTGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTG142
||||||||| ||||||||||| | ||||| ||||| |||||||| |||||||||||| ||
Sbjct166ATGAGAATTCTGATGGTTGGTCTCGATGCGGCTGGTAAGACCACCATCTTGTACAAGCTG225
Query143AAACTGGGTGAAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAG202
||||| ||||| || ||||| || || || || ||||| |||||||| ||||| |||||
Sbjct226AAACTTGGTGAGATCGTCACCACCATTCCTACCATTGGATTCAATGTGGAGACTGTGGAA285
Query203TACAAGAACATCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTT262
|||||||||||||||||||||||||||||||| || || |||||||| || ||||||
Sbjct286TACAAGAACATCAGCTTCACAGTGTGGGATGTCGGGGGTCAAGACAAGATCCGACCATTG345
Query263TGGAGGCATTATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGA322
|||||||| ||||| || ||||| || || ||||| |||||| |||||||||||||||
Sbjct346TGGAGGCACTATTTCCAAAACACTCAGGGTCTCATCTTTGTTGTGGACAGTAATGACAGA405
Query323GAAAGAGTTGGTGAAGCAAGAGAAGAATTG-ATGAGGATGCTGAATGAAGATGAACTGAG381
||| |||| ||| || ||||| |||||| || |||||| |||| || |||||||||
Sbjct406GATCGTGTTGTTGAGGCCAGAGATGAATTGCAT-AGGATGTTGAACGAGGATGAACTCCG464
Query382AGATGCCATCCTCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGC441
|||||||| || || || || ||||||||||||||||||||||| |||||||| ||
Sbjct465AGATGCAGTGTTGCTCGTTTTCGCTAACAAACAGGATCTGCCAAATGCAATGAATGCCGC524
Query442AGAAATCACAGACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAG-G500
|| ||||| |||||||| ||||| |||||||| |||| || |||||||||| |
Sbjct525TGAGATCACTGACAAGCTCGGCCTCCACTCACTCCGCCAACGACACTGGTACATCCAGAG584
Query501CTACATGTGCCACAAGTGGAGACGG-CTTATATGAAGGACTGGATTGGCTGTCCAA555
| || ||||| ||||| || || ||| || ||||| ||||||||||| |||||
Sbjct585C-ACCTGTGCTACATCAGGTGAGGGTCTT-TACGAAGGCCTGGATTGGCTCTCCAA638
>ref|XM_005023737.1| PREDICTED: Anas platyrhynchos ADP-ribosylation factor 1 (ARF1),
mRNA
Length=1939
Score =372 bits (201),Expect = 2e-99
Identities = 401/501 (80%), Gaps = 0/501 (0%)
Strand=Plus/Plus
Query56TTCAAGGGCCTCTTTGGGAGGTCCGAAATGAGAATTTTGATGGTTGGTTTGGATGCTGCT115
||||| ||||||||||| ||||||| | ||| ||||||||| ||||||||||
Sbjct59TTCAAAGGCCTCTTTGGCAAAAAAGAAATGCGGATCCTCATGGTTGGTCTGGATGCTGCA118
Query116GGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTGAAATTGTCACAACGATCCCAACA175
|||||||| || |||||||||||||||||| |||||||| || || || ||||| ||
Sbjct119GGAAAGACTACTATCTTGTACAAACTGAAACTTGGTGAAATAGTAACTACTATCCCTACT178
Query176ATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACATCAGCTTCACAGTGTGGGATGTT235
|| || |||||||| || || || || ||||||||||||||||||||||||||||||||
Sbjct179ATAGGTTTCAATGTGGAAACGGTAGAATACAAGAACATCAGCTTCACAGTGTGGGATGTC238
Query236GGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATTATTTTCAGAACACACAAGGACTC295
|| ||||| || || |||||| || ||| | |||||||| |||||||||||||| ||
Sbjct239GGCGGCCAGGATAAGATCAGACCGCTCTGGCGCCATTATTTCCAGAACACACAAGGTCTG298
Query296ATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTGGTGAAGCAAGAGAAGAATTGATG355
||||||||| | ||||| |||||||||||| |||||| || ||||||||| |||
Sbjct299ATTTTTGTGGTTGACAGCAATGACAGAGAACGAGTGAACGAGGCCAGAGAAGAGCTCATG358
Query356AGGATGCTGAATGAAGATGAACTGAGAGATGCCATCCTCCTTGTGTTTGCGAACAAACAG415
|| ||| |||||||||| || ||||||||| ||| |||||||| |||||||||
Sbjct359AGAATGTTGGCAGAAGATGAGCTTAGAGATGCCGTTTTATTAGTGTTTGCTAACAAACAG418
Query416GATCTGCCAAATGCTATGAATGCTGCAGAAATCACAGACAAGCTTGGCCTGCACTCACTT475
|| ||||| || || |||||||| ||||||||||||||||| ||||| ||||| || |||
Sbjct419GACCTGCCCAACGCGATGAATGCAGCAGAAATCACAGACAAACTTGGACTGCATTCTCTT478
Query476CGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCACAAGTGGAGACGGCTTATATGAA535
||||| |||||||||||| || |||||||| || ||||||||| ||||||
Sbjct479CGTCACAGGAACTGGTACATCCAGGCAACCTGTGCCACTAGCGGAGACGGTCTCTATGAA538
Query536GGACTGGATTGGCTGTCCAAT556
|||||||| ||| ||||||||
Sbjct539GGACTGGACTGGTTGTCCAAT559
>ref|XM_004088641.1| PREDICTED: Nomascus leucogenys ADP-ribosylation factor 3 (ARF3),
mRNA
Length=3923
Score =364 bits (197),Expect = 4e-97
Identities = 387/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct194TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG253
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct254AGATCGTCACCACCATCCCTACCATTGGGTTCAATGTGGAGACAGTGGAGTATAAGAACA313
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| || |
Sbjct314TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACACT373
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct374ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA433
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct434ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTAC493
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct494TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG553
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct554ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA613
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct614CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA673
Query570A570
|
Sbjct674A674
>ref|XM_004088640.1| PREDICTED: Nomascus leucogenys ADP-ribosylation factor 3 (ARF3),
mRNA
Length=3898
Score =364 bits (197),Expect = 4e-97
Identities = 387/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct169TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG228
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct229AGATCGTCACCACCATCCCTACCATTGGGTTCAATGTGGAGACAGTGGAGTATAAGAACA288
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| || |
Sbjct289TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACACT348
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct349ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA408
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct409ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTAC468
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct469TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG528
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct529ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA588
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct589CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA648
Query570A570
|
Sbjct649A649
>ref|XM_004088639.1| PREDICTED: Nomascus leucogenys ADP-ribosylation factor 3 (ARF3),
mRNA
Length=4026
Score =364 bits (197),Expect = 4e-97
Identities = 387/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct297TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG356
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct357AGATCGTCACCACCATCCCTACCATTGGGTTCAATGTGGAGACAGTGGAGTATAAGAACA416
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| || |
Sbjct417TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACACT476
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct477ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA536
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct537ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTAC596
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct597TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG656
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct657ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA716
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct717CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA776
Query570A570
|
Sbjct777A777
>ref|XM_003252207.1| PREDICTED: Nomascus leucogenys ADP-ribosylation factor 3 (ARF3),
mRNA
Length=4128
Score =364 bits (197),Expect = 4e-97
Identities = 387/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct399TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG458
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct459AGATCGTCACCACCATCCCTACCATTGGGTTCAATGTGGAGACAGTGGAGTATAAGAACA518
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| || |
Sbjct519TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACACT578
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct579ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA638
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct639ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTAC698
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct699TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG758
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct759ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA818
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct819CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA878
Query570A570
|
Sbjct879A879
>gb|EU829048.1| Linum usitatissimum clone LU0031C12 mRNA sequence
Length=750
Score =364 bits (197),Expect = 4e-97
Identities = 384/476 (81%), Gaps = 6/476 (1%)
Strand=Plus/Plus
Query83ATGAGAATTTTGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTG142
||||||||| ||||||||||| | ||||| ||||| |||||||| |||||||||||| ||
Sbjct166ATGAGAATTCTGATGGTTGGTCTCGATGCGGCTGGTAAGACCACCATCTTGTACAAGCTG225
Query143AAACTGGGTGAAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAG202
||||| ||||| || ||| | || || || || ||||| |||||||| ||||| |||||
Sbjct226AAACTTGGTGAGATCGTCTCCACCATTCCTACCATTGGATTCAATGTGGAGACTGTGGAA285
Query203TACAAGAACATCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTT262
|||||||||||||||||||||||||||||||| || || |||||||| || ||||||
Sbjct286TACAAGAACATCAGCTTCACAGTGTGGGATGTCGGGGGTCAAGACAAGATCCGACCATTG345
Query263TGGAGGCATTATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGA322
|||||||| ||||| || ||||| || || ||||| |||||| |||||||||||||||
Sbjct346TGGAGGCACTATTTCCAAAACACTCAGGGTCTCATCTTTGTTGTGGACAGTAATGACAGA405
Query323GAAAGAGTTGGTGAAGCAAGAGAAGAATTG-ATGAGGATGCTGAATGAAGATGAACTGAG381
||| |||| ||| || ||||| |||||| || |||||| |||| || |||||||||
Sbjct406GATCGTGTTGTTGAGGCCAGAGATGAATTGCAT-AGGATGTTGAACGAGGATGAACTCCG464
Query382AGATGCCATCCTCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGC441
|||||||| || || || || ||||||||||||||| ||||||| |||||||| ||
Sbjct465AGATGCAGTGTTGCTCGTTTTCGCTAACAAACAGGATCTGTCAAATGCAATGAATGCCGC524
Query442AGAAATCACAGACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAG-G500
|| ||||| |||||||| ||||| |||||||| |||| || |||||||||| |
Sbjct525TGAGATCACTGACAAGCTCGGCCTCCACTCACTCCGCCAACGACACTGGTACATCCAGAG584
Query501CTACATGTGCCACAAGTGGAGACGG-CTTATATGAAGGACTGGATTGGCTGTCCAA555
| || ||||| ||||| || || ||| || ||||| ||||||||||| |||||
Sbjct585C-ACCTGTGCTACATCAGGTGAGGGTCTT-TACGAAGGCCTGGATTGGCTCTCCAA638
>ref|NM_001133245.1| Pongo abelii ADP-ribosylation factor 3 (ARF3), mRNA
emb|CR860810.1| Pongo abelii mRNA; cDNA DKFZp469P1914 (from clone DKFZp469P1914)
Length=3605
Score =364 bits (197),Expect = 4e-97
Identities = 387/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| |||||||||||| || |||||||| ||| | |||||| |||||||||| |
Sbjct349TGATGGTGGGCCTGGATGCTGCAGGGAAGACCACCATCCTATACAAGCTGAAACTGGGGG408
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| ||||||||||| || |||||||
Sbjct409AGATCGTCACGACCATCCCTACCATTGGGTTCAATGTGGAGACAGTGGAATATAAGAACA468
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| || |
Sbjct469TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACACT528
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| | || |||||| | ||||| |||||| ||||||
Sbjct529ACTTCCAGAACACCCAAGGATTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA588
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct589ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTAC648
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct649TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG708
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct709ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA768
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct769CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA828
Query570A570
|
Sbjct829A829
>ref|XM_003939112.1| PREDICTED: Saimiri boliviensis boliviensis ADP-ribosylation factor
3, transcript variant 3 (ARF3), mRNA
Length=1417
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct169TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG228
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||||||||| || ||||||||||| || |||||||
Sbjct229AGATAGTCACCACCATCCCTACCATTGGGTTCAACGTGGAGACAGTGGAATATAAGAACA288
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct289TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT348
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
|||| |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct349ATTTCCAGAACACTCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA408
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| ||||||||||||||||||||| || || ||| |||||| |
Sbjct409ATGAGGCCCGGGAAGAGCTGATGAGGATGCTGGCAGAGGACGAGCTCCGGGATGCTGTGC468
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct469TCCTTGTTTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG528
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct529ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA588
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || || ||| |||||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct589CCAGCGGGGATGGGCTGTATGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA648
Query570A570
|
Sbjct649A649
>ref|XM_003939111.1| PREDICTED: Saimiri boliviensis boliviensis ADP-ribosylation factor
3, transcript variant 2 (ARF3), mRNA
Length=1549
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct301TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG360
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||||||||| || ||||||||||| || |||||||
Sbjct361AGATAGTCACCACCATCCCTACCATTGGGTTCAACGTGGAGACAGTGGAATATAAGAACA420
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct421TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT480
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
|||| |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct481ATTTCCAGAACACTCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA540
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| ||||||||||||||||||||| || || ||| |||||| |
Sbjct541ATGAGGCCCGGGAAGAGCTGATGAGGATGCTGGCAGAGGACGAGCTCCGGGATGCTGTGC600
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct601TCCTTGTTTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG660
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct661ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA720
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || || ||| |||||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct721CCAGCGGGGATGGGCTGTATGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA780
Query570A570
|
Sbjct781A781
>ref|XM_003939110.1| PREDICTED: Saimiri boliviensis boliviensis ADP-ribosylation factor
3, transcript variant 1 (ARF3), mRNA
Length=1622
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct374TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG433
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||||||||| || ||||||||||| || |||||||
Sbjct434AGATAGTCACCACCATCCCTACCATTGGGTTCAACGTGGAGACAGTGGAATATAAGAACA493
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct494TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT553
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
|||| |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct554ATTTCCAGAACACTCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA613
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| ||||||||||||||||||||| || || ||| |||||| |
Sbjct614ATGAGGCCCGGGAAGAGCTGATGAGGATGCTGGCAGAGGACGAGCTCCGGGATGCTGTGC673
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct674TCCTTGTTTTTGCAAACAAACAGGATCTGCCTAATGCTATGAACGCTGCTGAGATCACAG733
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct734ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA793
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || || ||| |||||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct794CCAGCGGGGATGGGCTGTATGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA853
Query570A570
|
Sbjct854A854
>ref|XM_003906306.1| PREDICTED: Papio anubis ADP-ribosylation factor 3 (ARF3), mRNA
Length=4008
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct296TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG355
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||| |||||||| |||||||||||||| |||||||
Sbjct356AGATCGTCACCACCATCCCTACCATTGGATTCAATGTGGAGACAGTGGAGTATAAGAACA415
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct416TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT475
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct476ACTTCCAGAACACCCAAGGGTTAATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA535
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct536ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCAGAGGACGAGCTCCGGGATGCTGTAC595
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct596TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAATGCTGCTGAGATCACAG655
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct656ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA715
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct716CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA775
Query570A570
|
Sbjct776A776
>ref|XM_003906305.1| PREDICTED: Papio anubis ADP-ribosylation factor 3 (ARF3), mRNA
Length=3920
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct208TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG267
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||| |||||||| |||||||||||||| |||||||
Sbjct268AGATCGTCACCACCATCCCTACCATTGGATTCAATGTGGAGACAGTGGAGTATAAGAACA327
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct328TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT387
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct388ACTTCCAGAACACCCAAGGGTTAATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA447
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct448ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCAGAGGACGAGCTCCGGGATGCTGTAC507
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct508TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAATGCTGCTGAGATCACAG567
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct568ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA627
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct628CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA687
Query570A570
|
Sbjct688A688
>ref|XM_001104802.2| PREDICTED: Macaca mulatta ADP-ribosylation factor 3-like, transcript
variant 3 (LOC708716), mRNA
Length=4003
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct514TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG573
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||| |||||||| |||||||||||||| |||||||
Sbjct574AGATCGTCACCACCATCCCTACCATTGGATTCAATGTGGAGACAGTGGAGTATAAGAACA633
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct634TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT693
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct694ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA753
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct754ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCAGAGGACGAGCTCCGGGATGCTGTAC813
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct814TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAATGCTGCTGAGATCACAG873
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct874ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA933
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct934CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA993
Query570A570
|
Sbjct994A994
>dbj|AB220383.1| Macaca fascicularis mRNA, clone QbsB-11372: similar to Homo sapiens
ADP-ribosylation factor 3(ARF3), mRNA, NM_001659.1
Length=1082
Score =359 bits (194),Expect = 2e-95
Identities = 386/481 (80%), Gaps = 3/481 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| | |||||| |||||||||| |
Sbjct311TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTATACAAGCTGAAACTGGGGG370
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || ||||| |||||||| |||||||||||||| |||||||
Sbjct371AGATCGTCACCACCATCCCTACCATTGGATTCAATGTGGAGACAGTGGAGTATAAGAACA430
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
|||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| || |
Sbjct431TCAGCTTCACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACACT490
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||| ||||||
Sbjct491ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAA550
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| |||||||||||| |||||||| || || ||| |||||| |
Sbjct551ATGAGGCCCGGGAAGAGCTGATGAGAATGCTGGCAGAGGACGAGCTCCGGGATGCTGTAC610
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| ||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct611TCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTATGAATGCTGCTGAGATCACAG670
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGTTTATCCAGGCTACATGTGCCA512
||||||| |||||||| || ||||||||| | |||||| ||||| || |||||||
Sbjct671ACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCCA730
Query513CAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGA569
| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| ||||
Sbjct731CCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGA790
Query570A570
|
Sbjct791A791
>ref|XM_004446938.1| PREDICTED: Dasypus novemcinctus ADP-ribosylation factor 3 (ARF3),
mRNA
Length=1247
Score =348 bits (188),Expect = 4e-92
Identities = 377/470 (80%), Gaps = 5/470 (1%)
Strand=Plus/Plus
Query107GATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTGAAATTGTCACAACG166
|||||||| ||||||||||| ||| |||| ||| ||||||| || || || ||||| ||
Sbjct396GATGCTGCAGGAAAGACCACCATCCTGTATAAGCTGAAACTAGGGGAGATCGTCACCACC455
Query167ATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACATCAGCTTCACAGTG226
||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct456ATCCCCACCATTGGGTTTAATGTGGAGACAGTGGAGTACAAGAACATCAGCTTCACAGTT515
Query227TGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATTATTTTCAGAACACA286
|||||||| |||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||
Sbjct516TGGGATGTGGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACATTACTTCCAGAACACC575
Query287CAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTGGTGAAGCAAGAGAA346
|||||| ||||||||| | ||||| || ||| ||||||||| ||| ||
Sbjct576CAAGGCTTGATTTTTGTGGTCGACAGCAACGATCGGGAGCGAGTAAATGAGGCTCGGGAG635
Query347GAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCCTCCTTGTGTTTGCG406
||||||||||||| |||||||||| ||| |||||| |||||||| |||||
Sbjct636GAGCTGATGAGGATGTTGGCGGAAGATGAGCTCCGGGATGCTGTGCTCCTTGTCTTTGCA695
Query407AACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAGACAAGCTTGGCCTG466
||||||||||||||||| ||||| |||||||| || || ||||| |||||||| ||||||
Sbjct696AACAAACAGGATCTGCCTAATGCAATGAATGCAGCCGAGATCACGGACAAGCTGGGCCTG755
Query467CACTCACTTCGTAGTCGTCAA-TGGTTTATCCAGGCTACATGTGCCACAAGTGGAGACGG525
|| || || ||||| ||| |||||| |||||||| |||||||| || || |||||
Sbjct756CATTCCCTGCGTCACCG-CAACTGGTACATTCAGGCTACCTGTGCCACCAGCGGTGACGG814
Query526CTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGAAAT572
| || ||||| ||||| |||||| ||||| | ||| |||| |||||||
Sbjct815GCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAAAT864
>ref|NM_001015571.2| Bos taurus ADP-ribosylation factor 3 (ARF3), mRNA
gb|BC120186.1| Bos taurus ADP-ribosylation factor 3, mRNA (cDNA clone MGC:142561
IMAGE:8254989), complete cds
Length=1030
Score =348 bits (188),Expect = 4e-92
Identities = 385/482 (80%), Gaps = 5/482 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| |||||||| |||||||||| |
Sbjct311TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTGTACAAGCTGAAACTGGGCG370
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| ||||||||||||||||||||||
Sbjct371AGATCGTCACCACCATCCCCACCATTGGGTTCAATGTGGAGACAGTGGAGTACAAGAACA430
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| || |
Sbjct431TCAGCTTCACAGTTTGGGATGTAGGTGGCCAGGACAAGATTCGGCCTCTCTGGAGACACT490
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||||||||||
Sbjct491ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGAGAGCGAGTAA550
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| || |||||||||||||||||| ||||| ||| |||||| |
Sbjct551ATGAGGCCCGGGAGGAGCTGATGAGGATGCTGGCGGAGGATGAGCTCCGGGATGCTGTGC610
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| |||||||||||| |||| ||||| ||||||||||| || |||||||
Sbjct611TCCTTGTCTTTGCAAACAAACAGGATTTGCCTAATGCCATGAATGCTGCTGAGATCACAG670
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAA-TGGTTTATCCAGGCTACATGTGCC511
||||| | |||||||| || || |||| ||| |||||| ||||| || ||||||
Sbjct671ACAAGTTGGGCCTGCATTCCCTGCGCCACCG-CAACTGGTACATTCAGGCCACCTGTGCC729
Query512ACAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAG568
|| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| |||
Sbjct730ACCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAG789
Query569AA570
||
Sbjct790AA791
>gb|BT020934.1| Bos taurus ADP-ribosylation factor 3 (ARF3), mRNA, complete cds
Length=854
Score =348 bits (188),Expect = 4e-92
Identities = 385/482 (80%), Gaps = 5/482 (1%)
Strand=Plus/Plus
Query93TGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTG152
||||||| ||||||||| || ||||||||||| ||| |||||||| |||||||||| |
Sbjct150TGATGGTGGGCCTGGATGCCGCAGGAAAGACCACCATCCTGTACAAGCTGAAACTGGGCG209
Query153AAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACA212
| || ||||| || ||||| || |||||||||||||| ||||||||||||||||||||||
Sbjct210AGATCGTCACCACCATCCCCACCATTGGGTTCAATGTGGAGACAGTGGAGTACAAGAACA269
Query213TCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATT272
||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| || |
Sbjct270TCAGCTTCACAGTTTGGGATGTAGGTGGCCAGGACAAGATTCGGCCTCTCTGGAGACACT329
Query273ATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTG332
| || |||||||| |||||| || |||||| | ||||| |||||||||||||
Sbjct330ACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGAGAGCGAGTAA389
Query333GTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCC392
||| ||| || |||||||||||||||||| ||||| ||| |||||| |
Sbjct390ATGAGGCCCGGGAGGAGCTGATGAGGATGCTGGCGGAGGATGAGCTCCGGGATGCTGTGC449
Query393TCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAG452
||||||| ||||| |||||||||||| |||| ||||| ||||||||||| || |||||||
Sbjct450TCCTTGTCTTTGCAAACAAACAGGATTTGCCTAATGCCATGAATGCTGCTGAGATCACAG509
Query453ACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAA-TGGTTTATCCAGGCTACATGTGCC511
||||| | |||||||| || || |||| ||| |||||| ||||| || ||||||
Sbjct510ACAAGTTGGGCCTGCATTCCCTGCGCCACCG-CAACTGGTACATTCAGGCCACCTGTGCC568
Query512ACAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAG568
|| || || |||||| || ||||| ||||| |||||| ||||| | ||| |||| |||
Sbjct569ACCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAG628
Query569AA570
||
Sbjct629AA630
>ref|XM_005040511.1| PREDICTED: Ficedula albicollis ADP-ribosylation factor 1 (ARF1),
transcript variant X2, mRNA
Length=907
Score =344 bits (186),Expect = 5e-91
Identities = 426/545 (78%), Gaps = 3/545 (1%)
Strand=Plus/Plus
Query15AGTGAGAACTGA--TCAA-AATGGGGAACATGTTTGCTTCGCTGTTCAAGGGCCTCTTTG71
||||||||||||||||||| || || |||||||| ||||| ||||| ||||
Sbjct127AGTGAGAACATATCTCAACCATGGGAAATATTTTTGCTAACCTCTTCAAAGGCCTTTTTG186
Query72GGAGGTCCGAAATGAGAATTTTGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCT131
| ||||||| | ||| | |||||||||||||||||| |||||||| || || |
Sbjct187GCAAAAAAGAAATGCGTATTCTAATGGTTGGCCTGGATGCTGCAGGAAAGACAACTATTT246
Query132TGTACAAGTTGAAACTGGGTGAAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAG191
|||||||| ||||| |||||||| || || || || || || || || |||||||| |
Sbjct247TGTACAAACTTAAACTTGGTGAAATAGTAACTACTATTCCTACTATAGGTTTCAATGTGG306
Query192AGACAGTGGAGTACAAGAACATCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAA251
| ||||| || ||||||||||||||||||||||||||||| || ||||| || ||||| |
Sbjct307AAACAGTAGAATACAAGAACATCAGCTTCACAGTGTGGGACGTGGGTGGTCAGGACAAGA366
Query252TTCGACCCCTTTGGAGGCATTATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACA311
|||||||| ||| | || || || |||||||||||||| || ||||||||| | ||||
Sbjct367TCAGACCCCTCTGGCGCCACTACTTCCAGAACACACAAGGTCTGATTTTTGTGGTTGACA426
Query312GTAATGACAGAGAAAGAGTTGGTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAG371
| |||||||||||| | |||| || ||||||||| ||||| ||| ||||||
Sbjct427GCAATGACAGAGAACGTGTGAACGAGGCCAGAGAAGAGCTTATGAGAATGTTGGCAGAAG486
Query372ATGAACTGAGAGATGCCATCCTCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTA431
|||| || ||||||||||| |||||||| ||||||||||| ||||| || || |
Sbjct487ATGAGCTCAGAGATGCTGTTTTATTAGTGTTTGCTAACAAACAGGACCTGCCGAACGCCA546
Query432TGAATGCTGCAGAAATCACAGACAAGCTTGGCCTGCACTCACTTCGTAGTCGTCAATGGT491
||||||| ||||||||||||||||| ||||| ||||| || ||||||| ||||
Sbjct547TGAATGCAGCAGAAATCACAGACAAACTTGGACTGCATTCTCTTCGCCACAGGAACTGGT606
Query492TTATCCAGGCTACATGTGCCACAAGTGGAGACGGCTTATATGAAGGACTGGATTGGCTGT551
|||||||| || |||||||| |||||||||||| |||||||||||||| ||| |||
Sbjct607ACATCCAGGCAACCTGTGCCACTAGTGGAGACGGTCTCTATGAAGGACTGGACTGGTTGT666
Query552CCAAT556
|||||
Sbjct667CCAAT671
>ref|XM_004692792.1| PREDICTED: Condylura cristata ADP-ribosylation factor 3 (ARF3),
transcript variant X1, mRNA
Length=1033
Score =344 bits (186),Expect = 5e-91
Identities = 375/468 (80%), Gaps = 5/468 (1%)
Strand=Plus/Plus
Query107GATGCTGCTGGAAAGACCACAATCTTGTACAAGTTGAAACTGGGTGAAATTGTCACAACG166
|||||||| || |||||||| ||| |||| ||| |||||||||| || || ||||| ||
Sbjct333GATGCTGCAGGGAAGACCACCATCCTGTATAAGCTGAAACTGGGGGAGATCGTCACCACC392
Query167ATCCCAACAATTGGGTTCAATGTAGAGACAGTGGAGTACAAGAACATCAGCTTCACAGTG226
||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct393ATCCCTACCATTGGGTTCAATGTGGAGACAGTGGAGTACAAGAACATCAGCTTCACAGTT452
Query227TGGGATGTTGGTGGCCAAGACAAAATTCGACCCCTTTGGAGGCATTATTTTCAGAACACA286
||||| || |||||||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct453TGGGACGTGGGTGGCCAGGACAAGATTCGACCTCTCTGGAGACACTACTTCCAGAACACC512
Query287CAAGGACTCATTTTTGTGATAGACAGTAATGACAGAGAAAGAGTTGGTGAAGCAAGAGAA346
|||||| || |||||| | ||||| |||||| ||||||||| ||| ||
Sbjct513CAAGGGTTGATATTTGTGGTTGACAGCAATGATCGGGAGCGAGTCAATGAGGCCCGGGAG572
Query347GAATTGATGAGGATGCTGAATGAAGATGAACTGAGAGATGCCATCCTCCTTGTGTTTGCG406
|||||||||||||||||| ||||||||| |||||| ||||| || |||||
Sbjct573GAGCTGATGAGGATGCTGGCAGAGGATGAACTTCGGGATGCTGTGCTCCTGGTTTTTGCA632
Query407AACAAACAGGATCTGCCAAATGCTATGAATGCTGCAGAAATCACAGACAAGCTTGGCCTG466
|||||||||||| |||| || |||||||| ||||| || |||||||||||||| ||||||
Sbjct633AACAAACAGGATTTGCCCAACGCTATGAACGCTGCTGAGATCACAGACAAGCTGGGCCTG692
Query467CACTCACTTCGTAGTCGTCAA-TGGTTTATCCAGGCTACATGTGCCACAAGTGGAGACGG525
||||| || ||||| ||| |||||| ||||| || |||||||| || || |||||
Sbjct693CACTCCCTGCGTCACCG-CAACTGGTACATTCAGGCCACCTGTGCCACCAGCGGGGACGG751
Query526CTTATATGAAGGACTGGATTGGCTGTCCAAT-A-CTCTAAAA-AAGAA570
| |||||||| ||||| |||||| ||||| | ||| |||| |||||
Sbjct752GCTGTATGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAA799
>ref|XM_002194789.2| PREDICTED: Taeniopygia guttata ADP-ribosylation factor 1 (ARF1),
mRNA
Length=2056
Score =344 bits (186),Expect = 5e-91
Identities = 426/545 (78%), Gaps = 3/545 (1%)
Strand=Plus/Plus
Query15AGTGAGAACTGA--TCAA-AATGGGGAACATGTTTGCTTCGCTGTTCAAGGGCCTCTTTG71
||||||||||||||||||| || || |||||||| ||||| ||||| ||||
Sbjct64AGTGAGAACATATCTCAATCATGGGAAATATTTTTGCTAACCTCTTCAAAGGCCTTTTTG123
Query72GGAGGTCCGAAATGAGAATTTTGATGGTTGGTTTGGATGCTGCTGGAAAGACCACAATCT131
| ||||||| | ||| | |||||||||||||||||| |||||||| || || |
Sbjct124GCAAAAAAGAAATGCGTATTCTAATGGTTGGCCTGGATGCTGCAGGAAAGACAACTATTT183
Query132TGTACAAGTTGAAACTGGGTGAAATTGTCACAACGATCCCAACAATTGGGTTCAATGTAG191
| |||||| ||||| |||||||| || || || || || || || || |||||||| |
Sbjct184TATACAAACTTAAACTTGGTGAAATAGTAACTACTATTCCTACTATAGGTTTCAATGTGG243
Query192AGACAGTGGAGTACAAGAACATCAGCTTCACAGTGTGGGATGTTGGTGGCCAAGACAAAA251
| ||||| || |||||||||||||||||||||||||||||||| || || || ||||| |
Sbjct244AAACAGTAGAATACAAGAACATCAGCTTCACAGTGTGGGATGTGGGCGGTCAGGACAAGA303
Query252TTCGACCCCTTTGGAGGCATTATTTTCAGAACACACAAGGACTCATTTTTGTGATAGACA311
||||| || ||| | || || || |||||||||||||| || ||||||||| | ||||
Sbjct304TCAGACCACTGTGGCGCCACTACTTCCAGAACACACAAGGTCTGATTTTTGTGGTTGACA363
Query312GTAATGACAGAGAAAGAGTTGGTGAAGCAAGAGAAGAATTGATGAGGATGCTGAATGAAG371
| |||||||||||| | |||| || ||||||||| ||||||||| ||||||
Sbjct364GCAATGACAGAGAACGTGTGAACGAGGCCAGAGAAGAGCTTATGAGGATGTTGGCAGAAG423
Query372ATGAACTGAGAGATGCCATCCTCCTTGTGTTTGCGAACAAACAGGATCTGCCAAATGCTA431
|||| || ||||||||||| |||||||| ||||||||||| ||||| || || |
Sbjct424ATGAGCTCAGAGATGCTGTTTTATTAGTGTTTGCTAACAAACAGGACCTGCCG
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