One of the important tasks in computational biology is to find short repeating patterns from DNA...
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One of the important tasks in computational biology is to find short repeating patterns from DNA sequences. These patterns help the biologists to analyze the functionality of different parts in a living being. As a computer science student, you are asked to write a program that will find all the patterns of a given length from a DNA sequence and their number of presence in that sequence. This information will help to find the dominant pattern of a given length in the sequence. You will also find the dominant pattern. Dominant pattern is the sequence which has maximum occurrence. If there are multiple dominant pattern the program will print "No Dominant Pattern found." Sample Input: ATTCGATCG 3 Sample Output: ATT 1 TTC 1 TCG 2 CGA 1 GAT 1 ATC 1 Dominant Pattern: TCG One of the important tasks in computational biology is to find short repeating patterns from DNA sequences. These patterns help the biologists to analyze the functionality of different parts in a living being. As a computer science student, you are asked to write a program that will find all the patterns of a given length from a DNA sequence and their number of presence in that sequence. This information will help to find the dominant pattern of a given length in the sequence. You will also find the dominant pattern. Dominant pattern is the sequence which has maximum occurrence. If there are multiple dominant pattern the program will print "No Dominant Pattern found." Sample Input: ATTCGATCG 3 Sample Output: ATT 1 TTC 1 TCG 2 CGA 1 GAT 1 ATC 1 Dominant Pattern: TCG
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Related Book For
Smith and Roberson Business Law
ISBN: 978-0538473637
15th Edition
Authors: Richard A. Mann, Barry S. Roberts
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