Question: Tree and Center Star Alignment [ 2 5 points ] Consider the following four strings v 1 , v 2 , v 3 , v
Tree and Center Star Alignment points
Consider the following four strings :
: CGGGAGTGA
: CGTTAGGGA
: CGTTGGA
: AGTTGGGAA
Here are their precomputed optimal pairwise alignments with a cost of for matches and otherwise:
a Give i all induced pairwise alignments and ii their scores of the following multiple sequence alignment of
: CGGGAGTGA
: CGTTAGGGA
:
: AGTTGGGAA
Use the same costscoring function as Edit Distance. So a cost of for matches and for mismatchesgaps points
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