Question: Using my below MSA, phylogenetic tree to determine the evolutionary relationship between the proteins we are analyzing. For your answer copy/paste an image of the
Using my below MSA, phylogenetic tree to determine the evolutionary relationship between the proteins we are analyzing. For your answer copy/paste an image of the tree and explain what species the plant you discovered appear to be most like? Provide the species name as your answer along with the image of the tree. This is the MSA >Sorghum bicolor
MAGGG--DHNSAQTNGGGH----------------------------------DQRAMEE
GRKEAEYADHQGCAAMVVSVP----------FIQKIIAEIFGTYFLMFAGCGAVTINASK
NGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTFAFATSGRFPWRQLPAYVLAQML
GAVLASGTLRLMFG-------GRHEHFPG-----TLPTGSD-------------VQSLVI
EIITTFYLMFVISGVA--TDNRAIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPA
L-----------VSGEYRSIWVYVVGPLVGAVAGAWAYNLI-------------------
-----------------------------RFTNKPLREITKSTSFLKS----------MS
TNRMNSAAA--
>Zea mays
MAGGG--DH--SQTNGGHV----------------------------------DQRALEE
GRKE-EFAD-QGCAAMVVSVP----------FIQKIIAEIFGTYFLMFAGCGAVTINASK
NGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQML
GATLASGTLRLMFG-------GRHEHFPG-----TLPTGSE-------------VQSLVI
EIITTFYLMFVISGVA--TDNRAIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPA
L-----------VSGEYTSIWVYVVGPVVGAVAGAWAYNLI-------------------
-----------------------------RFTNKPLREITKSTSFLK------------S
TSRMNSAASA-
>Brachypodium distachyon
MAGGG--DN--AQTNGAAAR---------------------------------DQAAMEE
GRKD-DY-D-QGC-GLAISVP----------FVQKIIAEIFGTYFLIFAGCGAVTINASR
NGQITFPGVAIVWGLAVMVMIYAVGHISGAHFNPAVTFAFATVGRFPWRQVPAYVLAQML
GATLASGTLRLMFG-------GRHEHFPG-----TLPGGSE-------------VQSLVL
EFIITFYLMFVISGVA--TDNRAIGELAGLAVGATILLNVLIAGPISGASMNPARTVGPA
L-----------VGSEYRSIWVYVVGPVAGAVAGAWSYNLI-------------------
-----------------------------RFTNKPLREITKSTSFLR------------S
MSRMNSVAA--
>Medicago truncatula
MA-----DH--SSSNGNHE----------------------------------TVLNVN-
-GDASQNCD-ESC--IQDYVP----------LLQKLVAEVVGTYFLIFAGCAAVVVNLDN
DKVVTHPGISIVWGLTVMVLVYSVGHISGAHFNPAVTIAHASTKRFPVKQVPAYILSQVL
GSTLASGTLRLIFN-------GKENHFSG-----TLPTGSD-------------LQAFVV
EFIITFYLMFVISGVA--TDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPA
I-----------VHHEYRGIWIYLVSTTLGAIAGTWAYTFI-------------------
-----------------------------RYTNKPVREISKSASFLK------------G
VQNGGAK----
>Ricinus communis
MA-----E---ISGNGNHG----------------------------------VVLDIKD
VNPPPSASK-DSV--LSFSVP----------FMQKLIAEMVGTYFLIFAGCTSVAVNLNF
DKVVTLPGISIVWGLAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYIACQVI
GSTLAAGTIRLIFT-------GKQDHFTG-----TMPAGSD-------------MQSFVV
EFIITFYLMFIISGVA--TDNRAIGELAGLAVGATVLLNVMFAGPISGASMNPARSLGPA
I-----------VSHKYKGLWIYIVSPTLGAQAGAWVYNMI-------------------
-----------------------------RYTDKPLREITKSASFLK------------S
TGRA-------
>Populus trichocarpa
-----------------------------------------------------MYSDLQR
-NNPTRKHK-GLK--MKLREK----------RVVMLVAEIAGTYFLIFAGCSSVAVNLNF
DKVVTLPGISITWGLAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYVACQVI
GATLAAGTIRLLFQ-------GDQDHFTG-----TMPAGSN-------------LQSFVV
EFIITFYLMFIISGVA--TDNRAIGELAGLAVGSTVLLNVMFAGPISGASMNPARSLGPA
I-----------VSHQYKGLWIYIVSPILGAQAGAWVYNLI-------------------
-----------------------------RYTDKPLREITKSASFLN------------G
KESS-------
>Arabidopsis thaliana
MA-----D---ISGNGYGNA-------------------REEVVMVNLKDEVEHQQEMED
IHNPRPLKKQDSL--LSVSVP----------FLQKLIAEFLGTYFLVFTGCASVVVNMQN
DNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVI
GSTLAAATLRLLFGLDHDVCSGKHDVFIG-----SSPVGSD-------------LQAFTM
EFIVTFYLMFIISGVA--TDNRAIGELAGLAIGSTVLLNVLIAA----------------
------------------------------------------------------------
------------------------------------------------------------
-----------
>Vitis vinifera
MA-------------------------------------EVNILPVGCSPKPPTISDLSP
VEEEKVISISESTESTIASPP----------YGHKILAELVGTYVIIFAGCGCVLIDKKY
RLTVT--GIAVGWGMIVMVMIYTLGHVSGGHFNPAVTIAFAASRKFPWRQVPPYVLSQVA
GSSLAILTLFVMLNTSIPIC-ATVTQFSSP---TTIP------------------EAFTW
EFIISFILMLAICGVA--TDSRAINELSGVTVGATVLVNVLLAGPITGASMNPARSIGPA
L-----------VSMEFDCLWIYIVAPILGTTTATVIYSFV-------------------
-----------------------------RL---PLPEKRL-------------------
-----------
>Glycine max
MEG--------TSSQSTFA-----------------------FIPSTIETPSPSIPEISS
SSSPGSLAR------IAQSYPP--------GFPRKVLAEIIGTFLLVFVGSGSAGLSKID
ERMVSKLGASLAGGLIVTVMIYSIGHISGAHMNPAVSLAFTAVRHLPWPQLPFYIAAQLT
GAISASYTLRELLR--------PSNEIGG-----TSPAGSH-------------IQALIM
EMVTTYTMVFISMAVA--TDSNATGQLSGVAVGSSVCIASIVAGPISGGSMNPARTLGPA
I-----------ATSYYKGLWVYFVGPITGAVLAAWSYNVI-------------------
-----------------------------RDTEHPGFPISLSSISSKVRQSI------GG
TEQKSDQRCLV
I used the MAFFT tool
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