Question: Which of the optimization methods ( i . e . methods to find the best tree ) that we discussed in class were used in

Which of the optimization methods (i.e. methods to find the best tree) that we discussed in class were used in the Metzker, M.L., Mindell, D.P., Liu, X.M., Ptak, R.G., Gibbs, R.A. and Hillis, D.M.2002. Molecular evidence of HIV-1 transmission in a criminal case. Proceedings of the National Academy of Sciences 99(22) : 14292-14297? Briefly explain what is different about the different methods that were used.
Which of the optimization methods (i.e. methods to find the best

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