Question: python delete double white space between columns from txt file and save result in new file I have txt file 1 has the following contents:
python delete double white space between columns from txt file and save result in new file
I have txt file 1 has the following contents:
AW_003015.1 156 VPSELGGVGLKNTQYARLVEI AS_010029.1 215 LASGETVAAFKLTEPSSGSDA CE_010039.1 433 SEAAWKVTDEKIQIMGGMGFM RN_000019.1 477 ILRLFVALQGKMDKGKELSGL DP_020039.1 603 HPTAQHEKMLKDTWCIEAAAR
I want to make single line space between columns and save that in new txt file as following:
AW_003015.1 156 VPSELGGVGLKNTQYARLVEI AS_010029.1 215 LASGETVAAFKLTEPSSGSDA CE_010039.1 433 SEAAWKVTDEKIQIMGGMGFM RN_000019.1 477 ILRLFVALQGKMDKGKELSGL DP_020039.1 603 HPTAQHEKMLKDTWCIEAAAR
This is my code I did not be able to do that:
outfile = open("file2.txt", "w") # Clears existing file, open for writing
with open("file1.txt") as infile:
for line in infile:
line = line.strip()
#print(line)
if line:
line = line.strip()
while ' ' in line:
line = line.replace(' ', '')
print(line)
outfile.write(line)
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