Question: Transition state theory 2 0 p t s . The enzyme aspartate aminotransferase catalyzes the formation of tyrosyl - tRNA for protein synthesis. In the
Transition state theory The enzyme aspartate aminotransferase catalyzes the formation of tyrosyltRNA for protein synthesis. In the first step of the reaction, tyrosine and ATP react to form tyrosyladenylate TyrAMP For the purposes of this problem, consider the simplified kinetic scheme below we will assume ATP is saturating so we can ignore the ATP binding step and start with enzyme bound to ATP:
a pts Given an enzymatic reaction in which calculate the value of the barrier between and at Assume the transmission coefficient Give your answer in kca
b Sketch a free energy profile for the enzymatic reaction, showing the three states in the kinetic scheme above Tyr Tyr and :AMP and the transition states between them.
Use to calculate using a standard state of in practice this means convert from to to calculate
Assume between Tyr and AMP is kca
You can choose an arbitrary barrier height for the transition from to
Show on your plot. Make sure that the relative energy levels and barrier heights reflect these free energy values.
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